Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.51■□□□□ 0.55
TRANK1O15050 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.51■□□□□ 0.55
TRANK1O15050 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.51■□□□□ 0.55
TRANK1O15050 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRANK1O15050 TUBB3P1-201ENST00000405796 1332 ntBASIC18.51■□□□□ 0.55
TRANK1O15050 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRANK1O15050 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.5■□□□□ 0.55
TRANK1O15050 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.5■□□□□ 0.55
TRANK1O15050 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.5■□□□□ 0.55
TRANK1O15050 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 AC009949.1-201ENST00000623048 1830 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.5■□□□□ 0.55
TRANK1O15050 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 AC103564.2-201ENST00000432853 1299 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 SPDYE11-202ENST00000450699 704 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 SPDYE9P-201ENST00000570642 692 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 STK25P1-201ENST00000585406 838 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 SPDYE10P-202ENST00000612005 668 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 SPDYE8P-202ENST00000612377 668 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRANK1O15050 AC005332.7-201ENST00000614046 2005 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRANK1O15050 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRANK1O15050 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 PTCHD3P3-201ENST00000403073 906 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 AC140658.5-201ENST00000438532 169 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.5■□□□□ 0.55
TRANK1O15050 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.5■□□□□ 0.55
TRANK1O15050 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRANK1O15050 ACTL9-202ENST00000612068 1252 ntBASIC18.5■□□□□ 0.55
TRANK1O15050 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRANK1O15050 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 AC126763.1-201ENST00000552015 2118 ntBASIC18.49■□□□□ 0.55
TRANK1O15050 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.49■□□□□ 0.55
TRANK1O15050 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.49■□□□□ 0.55
TRANK1O15050 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.49■□□□□ 0.55
TRANK1O15050 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.49■□□□□ 0.55
TRANK1O15050 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRANK1O15050 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.49■□□□□ 0.55
TRANK1O15050 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.49■□□□□ 0.55
TRANK1O15050 AC097637.2-201ENST00000624096 1997 ntBASIC18.49■□□□□ 0.55
TRANK1O15050 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 COX5BP2-201ENST00000392354 334 ntBASIC18.49■□□□□ 0.55
TRANK1O15050 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.49■□□□□ 0.55
TRANK1O15050 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRANK1O15050 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.49■□□□□ 0.55
TRANK1O15050 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.49■□□□□ 0.55
TRANK1O15050 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.48■□□□□ 0.55
TRANK1O15050 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRANK1O15050 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRANK1O15050 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.48■□□□□ 0.55
TRANK1O15050 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.48■□□□□ 0.55
TRANK1O15050 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.48■□□□□ 0.55
TRANK1O15050 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.48■□□□□ 0.55
TRANK1O15050 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.48■□□□□ 0.55
TRANK1O15050 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.48■□□□□ 0.55
TRANK1O15050 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRANK1O15050 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRANK1O15050 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRANK1O15050 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.48■□□□□ 0.55
TRANK1O15050 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.48■□□□□ 0.55
TRANK1O15050 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRANK1O15050 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRANK1O15050 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRANK1O15050 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRANK1O15050 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TRANK1O15050 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.47■□□□□ 0.55
TRANK1O15050 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 NME2P1-201ENST00000426182 414 ntBASIC18.47■□□□□ 0.55
TRANK1O15050 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.47■□□□□ 0.55
TRANK1O15050 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.47■□□□□ 0.55
TRANK1O15050 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.47■□□□□ 0.55
TRANK1O15050 AL135744.1-201ENST00000565098 629 ntBASIC18.47■□□□□ 0.55
TRANK1O15050 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRANK1O15050 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms