Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPEO14579 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.78■□□□□ 0.44
COPEO14579 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
COPEO14579 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.78■□□□□ 0.44
COPEO14579 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.78■□□□□ 0.44
COPEO14579 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
COPEO14579 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 AC012618.2-201ENST00000428058 849 ntBASIC17.78■□□□□ 0.44
COPEO14579 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.78■□□□□ 0.44
COPEO14579 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 AL049637.2-201ENST00000641778 930 ntBASIC17.78■□□□□ 0.44
COPEO14579 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.78■□□□□ 0.44
COPEO14579 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
COPEO14579 REXO1L11P-201ENST00000620964 1927 ntBASIC17.78■□□□□ 0.44
COPEO14579 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPEO14579 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COPEO14579 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.77■□□□□ 0.44
COPEO14579 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COPEO14579 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.77■□□□□ 0.44
COPEO14579 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COPEO14579 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COPEO14579 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.77■□□□□ 0.44
COPEO14579 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.77■□□□□ 0.44
COPEO14579 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
COPEO14579 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 KRT18P29-201ENST00000397031 1267 ntBASIC17.77■□□□□ 0.44
COPEO14579 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.77■□□□□ 0.44
COPEO14579 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COPEO14579 AC233702.5-201ENST00000584107 538 ntBASIC17.77■□□□□ 0.44
COPEO14579 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.77■□□□□ 0.44
COPEO14579 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COPEO14579 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPEO14579 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COPEO14579 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.77■□□□□ 0.43
COPEO14579 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPEO14579 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COPEO14579 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
COPEO14579 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
COPEO14579 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.76■□□□□ 0.43
COPEO14579 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
COPEO14579 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPEO14579 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COPEO14579 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COPEO14579 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.76■□□□□ 0.43
COPEO14579 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.76■□□□□ 0.43
COPEO14579 FAM201B-201ENST00000458407 597 ntBASIC17.76■□□□□ 0.43
COPEO14579 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPEO14579 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.76■□□□□ 0.43
COPEO14579 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.76■□□□□ 0.43
COPEO14579 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
COPEO14579 ITM2C-210ENST00000620962 501 ntBASIC17.76■□□□□ 0.43
COPEO14579 AC116562.4-202ENST00000641738 218 ntBASIC17.76■□□□□ 0.43
COPEO14579 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
COPEO14579 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.76■□□□□ 0.43
COPEO14579 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COPEO14579 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COPEO14579 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COPEO14579 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPEO14579 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.75■□□□□ 0.43
COPEO14579 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
COPEO14579 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COPEO14579 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPEO14579 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms