Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 AC246785.2-201ENST00000432512 513 ntBASIC18.95■□□□□ 0.62
O00370 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.95■□□□□ 0.62
O00370 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
O00370 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 AC011840.4-201ENST00000578471 627 ntBASIC18.95■□□□□ 0.62
O00370 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.95■□□□□ 0.62
O00370 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.95■□□□□ 0.62
O00370 AC005336.2-201ENST00000593183 939 ntBASIC18.95■□□□□ 0.62
O00370 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.95■□□□□ 0.62
O00370 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 AC092119.3-201ENST00000612618 583 ntBASIC18.95■□□□□ 0.62
O00370 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
O00370 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.95■□□□□ 0.62
O00370 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.95■□□□□ 0.62
O00370 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 AC233702.3-201ENST00000578656 1387 ntBASIC18.94■□□□□ 0.62
O00370 AC006116.8-202ENST00000587620 1550 ntBASIC18.94■□□□□ 0.62
O00370 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.94■□□□□ 0.62
O00370 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.94■□□□□ 0.62
O00370 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
O00370 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.94■□□□□ 0.62
O00370 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
O00370 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
O00370 TOB2P1-201ENST00000469761 992 ntBASIC18.94■□□□□ 0.62
O00370 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
O00370 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.94■□□□□ 0.62
O00370 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.94■□□□□ 0.62
O00370 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.94■□□□□ 0.62
O00370 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
O00370 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
O00370 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
O00370 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.94■□□□□ 0.62
O00370 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.94■□□□□ 0.62
O00370 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
O00370 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
O00370 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.94■□□□□ 0.62
O00370 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
O00370 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
O00370 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
O00370 AC009949.1-201ENST00000623048 1830 ntBASIC18.93■□□□□ 0.62
O00370 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
O00370 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
O00370 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.93■□□□□ 0.62
O00370 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
O00370 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.93■□□□□ 0.62
O00370 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.93■□□□□ 0.62
O00370 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.93■□□□□ 0.62
O00370 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.93■□□□□ 0.62
O00370 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.93■□□□□ 0.62
O00370 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.93■□□□□ 0.62
O00370 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
O00370 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.93■□□□□ 0.62
O00370 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
O00370 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
O00370 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
O00370 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.93■□□□□ 0.62
O00370 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.93■□□□□ 0.62
O00370 PP12613-201ENST00000424958 2230 ntBASIC18.93■□□□□ 0.62
O00370 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
O00370 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.92■□□□□ 0.62
O00370 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.92■□□□□ 0.62
O00370 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.92■□□□□ 0.62
O00370 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms