Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 AC092902.6-201ENST00000641783 218 ntBASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN10AQ9Y5Y9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 SNHG9-202ENST00000564014 471 ntBASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SCN10AQ9Y5Y9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 MYCLP1-201ENST00000372451 1075 ntBASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 LINC00982-205ENST00000420957 435 ntBASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 CEND1P1-201ENST00000451006 455 ntBASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 AC091812.2-201ENST00000619081 385 ntBASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 REXO1L11P-201ENST00000620964 1927 ntBASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN10AQ9Y5Y9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 AL645939.2-201ENST00000427340 991 ntBASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 FAM58CP-201ENST00000435741 640 ntBASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms