Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 AC112698.1-201ENST00000510299 916 ntBASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 AC243591.1-201ENST00000452967 1364 ntBASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 KRT18P13-201ENST00000400056 1290 ntBASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX2IPQ9Y2D8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 RPL13AP23-201ENST00000480739 586 ntBASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 SLC25A1P1-201ENST00000528351 927 ntBASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX2IPQ9Y2D8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 AL356309.3-201ENST00000624132 1934 ntBASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 MIR7706-201ENST00000613747 67 ntBASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 AL139288.1-201ENST00000623748 933 ntBASIC19.1■□□□□ 0.65
SSX2IPQ9Y2D8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms