Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 KRT8P47-201ENST00000604727 1398 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 AL645929.1-201ENST00000420084 975 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 MTCL1P1-201ENST00000446207 792 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 AC083849.1-201ENST00000615227 514 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 AC009949.1-201ENST00000623048 1830 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 Z83836.1-201ENST00000624605 1642 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 BX276092.7-203ENST00000637198 1536 ntBASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS9D1Q9Y2B5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 AC068472.1-201ENST00000474589 881 ntBASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS9D1Q9Y2B5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VPS9D1Q9Y2B5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
VPS9D1Q9Y2B5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VPS9D1Q9Y2B5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.71■□□□□ 0.42
VPS9D1Q9Y2B5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 GUSBP12-201ENST00000513727 720 ntBASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS9D1Q9Y2B5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 HLA-J-201ENST00000462773 1622 ntBASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS9D1Q9Y2B5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms