Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 AC008687.5-201ENST00000593746 558 ntBASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 AC141257.4-201ENST00000634557 245 ntBASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 AC136944.6-201ENST00000634818 245 ntBASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTI1BQ9UEU0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 BX664615.1-201ENST00000443558 458 ntBASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTI1BQ9UEU0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 FAM210CP-201ENST00000445714 574 ntBASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 NEK4P2-201ENST00000580004 1012 ntBASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 AC116407.2-201ENST00000613639 860 ntBASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 LINC01451-201ENST00000623792 534 ntBASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms