Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VPS11Q9H270 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS11Q9H270 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VPS11Q9H270 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VPS11Q9H270 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
VPS11Q9H270 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 INGX-201ENST00000359239 846 ntBASIC17.91■□□□□ 0.46
VPS11Q9H270 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS11Q9H270 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS11Q9H270 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS11Q9H270 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS11Q9H270 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
VPS11Q9H270 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS11Q9H270 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS11Q9H270 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS11Q9H270 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VPS11Q9H270 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 SEC1P-202ENST00000473944 940 ntBASIC17.9■□□□□ 0.46
VPS11Q9H270 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS11Q9H270 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VPS11Q9H270 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS11Q9H270 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS11Q9H270 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS11Q9H270 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VPS11Q9H270 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.89■□□□□ 0.46
VPS11Q9H270 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
VPS11Q9H270 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS11Q9H270 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.89■□□□□ 0.46
VPS11Q9H270 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS11Q9H270 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VPS11Q9H270 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VPS11Q9H270 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS11Q9H270 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 AC009947.2-201ENST00000444014 672 ntBASIC17.89■□□□□ 0.45
VPS11Q9H270 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.89■□□□□ 0.45
VPS11Q9H270 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS11Q9H270 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.89■□□□□ 0.45
VPS11Q9H270 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS11Q9H270 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VPS11Q9H270 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms