Protein–RNA interactions for Protein: Q78IS1

Tmed3, Transmembrane emp24 domain-containing protein 3, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed3Q78IS1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmed3Q78IS1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tmed3Q78IS1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Nespas-201ENSMUST00000143738 1083 ntBASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.43□□□□□ -0.42
Tmed3Q78IS1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms