Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 AL023284.2-201ENST00000405850 579 ntBASIC16.45■□□□□ 0.22
TUBA1AQ71U36 HMGA1P5-201ENST00000412453 271 ntBASIC16.45■□□□□ 0.22
TUBA1AQ71U36 LIN28AP1-201ENST00000429574 405 ntBASIC16.45■□□□□ 0.22
TUBA1AQ71U36 ATP5G1P1-201ENST00000448724 379 ntBASIC16.45■□□□□ 0.22
TUBA1AQ71U36 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 TERF1P1-201ENST00000311003 1181 ntBASIC16.44■□□□□ 0.22
TUBA1AQ71U36 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 RCN1P1-201ENST00000400413 996 ntBASIC16.44■□□□□ 0.22
TUBA1AQ71U36 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 RN7SL850P-201ENST00000579959 291 ntBASIC16.44■□□□□ 0.22
TUBA1AQ71U36 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 AC010653.2-201ENST00000623505 997 ntBASIC16.44■□□□□ 0.22
TUBA1AQ71U36 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBA1AQ71U36 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 AC036111.1-201ENST00000533973 1582 ntBASIC16.43■□□□□ 0.22
TUBA1AQ71U36 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms