Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 FAM185BP-201ENST00000443595 716 ntBASIC22.23■■□□□ 1.15
RC3H1Q5TC82 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 AC025678.2-201ENST00000562061 970 ntBASIC22.23■■□□□ 1.15
RC3H1Q5TC82 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 AC022145.2-201ENST00000598203 171 ntBASIC22.23■■□□□ 1.15
RC3H1Q5TC82 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 AL590787.1-201ENST00000568856 1315 ntBASIC22.23■■□□□ 1.15
RC3H1Q5TC82 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H1Q5TC82 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 ACTG1P4-201ENST00000425123 1122 ntBASIC22.22■■□□□ 1.15
RC3H1Q5TC82 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 PAWRP1-201ENST00000451083 565 ntBASIC22.22■■□□□ 1.15
RC3H1Q5TC82 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H1Q5TC82 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AL096828.2-201ENST00000567259 1965 ntBASIC22.21■■□□□ 1.15
RC3H1Q5TC82 PI4KAP1-204ENST00000612579 1703 ntBASIC22.21■■□□□ 1.15
RC3H1Q5TC82 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AC109322.1-201ENST00000524499 1264 ntBASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.21■■□□□ 1.15
RC3H1Q5TC82 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
RC3H1Q5TC82 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.2■■□□□ 1.15
RC3H1Q5TC82 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
RC3H1Q5TC82 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RC3H1Q5TC82 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.15
RC3H1Q5TC82 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RC3H1Q5TC82 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 MYCLP1-201ENST00000372451 1075 ntBASIC22.2■■□□□ 1.14
RC3H1Q5TC82 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RC3H1Q5TC82 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms