Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 AL135744.1-201ENST00000565098 629 ntBASIC15.3■□□□□ 0.04
LRRK2Q5S007 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 AC141586.3-201ENST00000562166 1838 ntBASIC15.29■□□□□ 0.04
LRRK2Q5S007 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.29■□□□□ 0.04
LRRK2Q5S007 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 AC106886.1-201ENST00000568660 600 ntBASIC15.29■□□□□ 0.04
LRRK2Q5S007 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.29■□□□□ 0.04
LRRK2Q5S007 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRK2Q5S007 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 AKAP8P1-201ENST00000434743 1349 ntBASIC15.29■□□□□ 0.04
LRRK2Q5S007 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRK2Q5S007 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 AC084121.4-201ENST00000641598 221 ntBASIC15.28■□□□□ 0.04
LRRK2Q5S007 AF228730.8-201ENST00000642140 221 ntBASIC15.28■□□□□ 0.04
LRRK2Q5S007 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRK2Q5S007 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRK2Q5S007 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 SPTSSB-204ENST00000617024 1292 ntBASIC15.27■□□□□ 0.04
LRRK2Q5S007 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.04
LRRK2Q5S007 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 PI4KAP1-204ENST00000612579 1703 ntBASIC15.27■□□□□ 0.04
LRRK2Q5S007 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRK2Q5S007 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRK2Q5S007 TSSK5P-201ENST00000423978 907 ntBASIC15.27■□□□□ 0.03
LRRK2Q5S007 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 TP53TG3HP-202ENST00000569755 579 ntBASIC15.27■□□□□ 0.03
LRRK2Q5S007 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms