Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.65□□□□□ -0.22
HIST1H1AQ02539 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 NAPSB-206ENST00000562112 1266 ntBASIC13.65□□□□□ -0.22
HIST1H1AQ02539 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 AC010653.2-201ENST00000623505 997 ntBASIC13.65□□□□□ -0.22
HIST1H1AQ02539 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 AL118508.1-201ENST00000613502 2345 ntBASIC13.65□□□□□ -0.22
HIST1H1AQ02539 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H1AQ02539 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 AL596257.1-201ENST00000641463 2694 ntBASIC13.64□□□□□ -0.23
HIST1H1AQ02539 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 TSPY14P-201ENST00000303979 915 ntBASIC13.64□□□□□ -0.23
HIST1H1AQ02539 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 EGLN1P1-201ENST00000531623 762 ntBASIC13.64□□□□□ -0.23
HIST1H1AQ02539 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 MIR4497-201ENST00000583208 89 ntBASIC13.64□□□□□ -0.23
HIST1H1AQ02539 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 AC080080.1-201ENST00000625121 2420 ntBASIC13.64□□□□□ -0.23
HIST1H1AQ02539 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms