Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GDNFP39905 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
GDNFP39905 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.54■□□□□ 0.08
GDNFP39905 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.54■□□□□ 0.08
GDNFP39905 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
GDNFP39905 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
GDNFP39905 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDNFP39905 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 AC011270.2-201ENST00000624293 2550 ntBASIC15.53■□□□□ 0.08
GDNFP39905 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 AC096733.2-201ENST00000609937 1394 ntBASIC15.53■□□□□ 0.08
GDNFP39905 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
GDNFP39905 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 CRYGFP-201ENST00000418459 633 ntBASIC15.53■□□□□ 0.08
GDNFP39905 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.53■□□□□ 0.08
GDNFP39905 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.53■□□□□ 0.08
GDNFP39905 AL355075.4-201ENST00000554988 638 ntBASIC15.53■□□□□ 0.08
GDNFP39905 MIR4785-201ENST00000585005 73 ntBASIC15.53■□□□□ 0.08
GDNFP39905 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 DGCR10-201ENST00000609839 495 ntBASIC15.53■□□□□ 0.08
GDNFP39905 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDNFP39905 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GDNFP39905 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.53■□□□□ 0.08
GDNFP39905 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.52■□□□□ 0.08
GDNFP39905 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
GDNFP39905 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 AC105020.1-201ENST00000435356 2205 ntBASIC15.52■□□□□ 0.08
GDNFP39905 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
GDNFP39905 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 AC106886.4-201ENST00000623557 2502 ntBASIC15.52■□□□□ 0.08
GDNFP39905 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 AC133963.1-201ENST00000504166 1679 ntBASIC15.52■□□□□ 0.08
GDNFP39905 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 AL596275.1-201ENST00000423464 877 ntBASIC15.52■□□□□ 0.08
GDNFP39905 AL390955.1-201ENST00000428694 934 ntBASIC15.52■□□□□ 0.08
GDNFP39905 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.52■□□□□ 0.08
GDNFP39905 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.52■□□□□ 0.08
GDNFP39905 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.52■□□□□ 0.08
GDNFP39905 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.52■□□□□ 0.08
GDNFP39905 MIR4497-201ENST00000583208 89 ntBASIC15.52■□□□□ 0.08
GDNFP39905 AP000525.1-201ENST00000608286 694 ntBASIC15.52■□□□□ 0.08
GDNFP39905 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDNFP39905 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
GDNFP39905 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
GDNFP39905 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GDNFP39905 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
GDNFP39905 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.52■□□□□ 0.07
GDNFP39905 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
GDNFP39905 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms