Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.27■□□□□ 0.84
COPB2P35606 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COPB2P35606 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.27■□□□□ 0.84
COPB2P35606 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPB2P35606 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.27■□□□□ 0.84
COPB2P35606 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.27■□□□□ 0.84
COPB2P35606 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.27■□□□□ 0.84
COPB2P35606 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.27■□□□□ 0.84
COPB2P35606 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.27■□□□□ 0.84
COPB2P35606 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.27■□□□□ 0.84
COPB2P35606 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.27■□□□□ 0.84
COPB2P35606 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.27■□□□□ 0.84
COPB2P35606 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
COPB2P35606 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
COPB2P35606 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPB2P35606 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
COPB2P35606 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COPB2P35606 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPB2P35606 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPB2P35606 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.26■□□□□ 0.83
COPB2P35606 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COPB2P35606 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COPB2P35606 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.26■□□□□ 0.83
COPB2P35606 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
COPB2P35606 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.26■□□□□ 0.83
COPB2P35606 AC073621.1-201ENST00000392730 636 ntBASIC20.26■□□□□ 0.83
COPB2P35606 UPF3AP3-201ENST00000420996 769 ntBASIC20.26■□□□□ 0.83
COPB2P35606 AC005104.2-201ENST00000427818 678 ntBASIC20.26■□□□□ 0.83
COPB2P35606 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.26■□□□□ 0.83
COPB2P35606 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
COPB2P35606 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COPB2P35606 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COPB2P35606 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
COPB2P35606 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPB2P35606 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.26■□□□□ 0.83
COPB2P35606 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COPB2P35606 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.25■□□□□ 0.83
COPB2P35606 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 AC003669.1-201ENST00000334569 611 ntBASIC20.25■□□□□ 0.83
COPB2P35606 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.25■□□□□ 0.83
COPB2P35606 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COPB2P35606 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.25■□□□□ 0.83
COPB2P35606 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.25■□□□□ 0.83
COPB2P35606 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.25■□□□□ 0.83
COPB2P35606 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.25■□□□□ 0.83
COPB2P35606 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
COPB2P35606 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPB2P35606 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.25■□□□□ 0.83
COPB2P35606 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COPB2P35606 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COPB2P35606 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
COPB2P35606 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.24■□□□□ 0.83
COPB2P35606 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
COPB2P35606 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.24■□□□□ 0.83
COPB2P35606 AC002347.1-201ENST00000569543 541 ntBASIC20.24■□□□□ 0.83
COPB2P35606 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms