Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.51■□□□□ 0.07
UPK1BO75841 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 AL035685.1-201ENST00000636663 812 ntBASIC15.51■□□□□ 0.07
UPK1BO75841 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.51■□□□□ 0.07
UPK1BO75841 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.51■□□□□ 0.07
UPK1BO75841 SDHAP2-201ENST00000455183 2001 ntBASIC15.51■□□□□ 0.07
UPK1BO75841 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 AC099343.3-201ENST00000605834 2503 ntBASIC15.5■□□□□ 0.07
UPK1BO75841 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
UPK1BO75841 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.5■□□□□ 0.07
UPK1BO75841 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
UPK1BO75841 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1BO75841 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1BO75841 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
UPK1BO75841 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
UPK1BO75841 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1BO75841 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1BO75841 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
UPK1BO75841 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.49■□□□□ 0.07
UPK1BO75841 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.49■□□□□ 0.07
UPK1BO75841 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.49■□□□□ 0.07
UPK1BO75841 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1BO75841 AC069236.1-201ENST00000604339 616 ntBASIC15.49■□□□□ 0.07
UPK1BO75841 AC106739.1-201ENST00000617035 715 ntBASIC15.49■□□□□ 0.07
UPK1BO75841 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 HLA-A-209ENST00000638375 975 ntBASIC15.49■□□□□ 0.07
UPK1BO75841 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1BO75841 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
UPK1BO75841 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.49■□□□□ 0.07
UPK1BO75841 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1BO75841 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1BO75841 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UPK1BO75841 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
UPK1BO75841 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.48■□□□□ 0.07
UPK1BO75841 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms