Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX1O00570 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX1O00570 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX1O00570 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SOX1O00570 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.78■□□□□ 0.6
SOX1O00570 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.78■□□□□ 0.6
SOX1O00570 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.78■□□□□ 0.6
SOX1O00570 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX1O00570 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.78■□□□□ 0.6
SOX1O00570 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX1O00570 MIR6805-201ENST00000615055 62 ntBASIC18.78■□□□□ 0.6
SOX1O00570 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SOX1O00570 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.78■□□□□ 0.6
SOX1O00570 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX1O00570 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX1O00570 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SOX1O00570 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX1O00570 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX1O00570 FAM185BP-201ENST00000443595 716 ntBASIC18.77■□□□□ 0.6
SOX1O00570 SPTLC1P1-201ENST00000447199 261 ntBASIC18.77■□□□□ 0.6
SOX1O00570 AL513480.1-201ENST00000451731 511 ntBASIC18.77■□□□□ 0.6
SOX1O00570 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX1O00570 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.77■□□□□ 0.6
SOX1O00570 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX1O00570 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX1O00570 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX1O00570 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX1O00570 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX1O00570 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX1O00570 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SOX1O00570 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.76■□□□□ 0.59
SOX1O00570 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.76■□□□□ 0.59
SOX1O00570 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SOX1O00570 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SOX1O00570 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SOX1O00570 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.76■□□□□ 0.59
SOX1O00570 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.76■□□□□ 0.59
SOX1O00570 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SOX1O00570 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.76■□□□□ 0.59
SOX1O00570 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.76■□□□□ 0.59
SOX1O00570 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.76■□□□□ 0.59
SOX1O00570 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SOX1O00570 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.76■□□□□ 0.59
SOX1O00570 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 AL033527.4-201ENST00000641026 673 ntBASIC18.76■□□□□ 0.59
SOX1O00570 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX1O00570 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX1O00570 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX1O00570 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SOX1O00570 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX1O00570 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX1O00570 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX1O00570 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SOX1O00570 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.75■□□□□ 0.59
SOX1O00570 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SOX1O00570 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 TCF3P1-201ENST00000423021 1937 ntBASIC18.75■□□□□ 0.59
SOX1O00570 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms