Protein–RNA interactions for Protein: C9JLJ4

USP17L13, Ubiquitin carboxyl-terminal hydrolase 17-like protein 13, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L13C9JLJ4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP17L13C9JLJ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 SIGLEC16-201ENST00000599858 1437 ntBASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP17L13C9JLJ4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.57■□□□□ 0.88
USP17L13C9JLJ4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 COX5BP2-201ENST00000392354 334 ntBASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 UPF3AP3-201ENST00000420996 769 ntBASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 AC009947.1-201ENST00000444350 727 ntBASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 AC006557.2-201ENST00000592985 1240 ntBASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
USP17L13C9JLJ4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 SPDYE21P-201ENST00000413323 827 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 KRT18P27-201ENST00000427733 1299 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 RNA5SP416-201ENST00000516838 111 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 AC040169.1-201ENST00000565382 521 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 AC004817.3-201ENST00000602957 2129 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 MIR1199-201ENST00000621445 119 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 AC055717.3-201ENST00000622967 595 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 PGM5P2-202ENST00000637225 1043 ntBASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L13C9JLJ4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms