Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRIT2A6NDA9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIT2A6NDA9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIT2A6NDA9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIT2A6NDA9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIT2A6NDA9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.92■□□□□ 0.3
LRIT2A6NDA9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIT2A6NDA9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 PCDHB18P-201ENST00000524813 2368 ntBASIC16.91■□□□□ 0.3
LRIT2A6NDA9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 COX5BP2-201ENST00000392354 334 ntBASIC16.91■□□□□ 0.3
LRIT2A6NDA9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 LINC00265-3P-201ENST00000447588 903 ntBASIC16.91■□□□□ 0.3
LRIT2A6NDA9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 LINC00896-202ENST00000609602 2128 ntBASIC16.91■□□□□ 0.3
LRIT2A6NDA9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIT2A6NDA9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 AC007967.3-201ENST00000434308 558 ntBASIC16.9■□□□□ 0.3
LRIT2A6NDA9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 KRT17P6-201ENST00000453795 1220 ntBASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LRIT2A6NDA9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
LRIT2A6NDA9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.89■□□□□ 0.3
LRIT2A6NDA9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 LINC00304-203ENST00000565008 1864 ntBASIC16.89■□□□□ 0.29
LRIT2A6NDA9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT2A6NDA9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms