Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RtcAQ9D7H3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RtcAQ9D7H3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RtcAQ9D7H3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.8■■□□□ 1.08
RtcAQ9D7H3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RtcAQ9D7H3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RtcAQ9D7H3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.8■■□□□ 1.08
RtcAQ9D7H3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RtcAQ9D7H3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RtcAQ9D7H3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RtcAQ9D7H3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RtcAQ9D7H3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RtcAQ9D7H3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.77■■□□□ 1.08
RtcAQ9D7H3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.77■■□□□ 1.08
RtcAQ9D7H3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RtcAQ9D7H3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RtcAQ9D7H3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.76■■□□□ 1.07
RtcAQ9D7H3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RtcAQ9D7H3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RtcAQ9D7H3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RtcAQ9D7H3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RtcAQ9D7H3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RtcAQ9D7H3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.75■■□□□ 1.07
RtcAQ9D7H3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RtcAQ9D7H3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RtcAQ9D7H3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RtcAQ9D7H3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RtcAQ9D7H3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.74■■□□□ 1.07
RtcAQ9D7H3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RtcAQ9D7H3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RtcAQ9D7H3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RtcAQ9D7H3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.74■■□□□ 1.07
RtcAQ9D7H3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RtcAQ9D7H3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RtcAQ9D7H3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.73■■□□□ 1.07
RtcAQ9D7H3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RtcAQ9D7H3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RtcAQ9D7H3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RtcAQ9D7H3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RtcAQ9D7H3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RtcAQ9D7H3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RtcAQ9D7H3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RtcAQ9D7H3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RtcAQ9D7H3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.7■■□□□ 1.07
RtcAQ9D7H3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RtcAQ9D7H3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RtcAQ9D7H3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RtcAQ9D7H3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RtcAQ9D7H3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RtcAQ9D7H3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RtcAQ9D7H3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.68■■□□□ 1.06
RtcAQ9D7H3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RtcAQ9D7H3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.68■■□□□ 1.06
RtcAQ9D7H3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RtcAQ9D7H3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.68■■□□□ 1.06
RtcAQ9D7H3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RtcAQ9D7H3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.67■■□□□ 1.06
RtcAQ9D7H3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RtcAQ9D7H3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RtcAQ9D7H3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RtcAQ9D7H3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
RtcAQ9D7H3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RtcAQ9D7H3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.66■■□□□ 1.06
RtcAQ9D7H3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcAQ9D7H3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RtcAQ9D7H3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcAQ9D7H3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.65■■□□□ 1.06
RtcAQ9D7H3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RtcAQ9D7H3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcAQ9D7H3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcAQ9D7H3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RtcAQ9D7H3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RtcAQ9D7H3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RtcAQ9D7H3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RtcAQ9D7H3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.64■■□□□ 1.05
RtcAQ9D7H3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
RtcAQ9D7H3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.64■■□□□ 1.05
RtcAQ9D7H3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcAQ9D7H3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RtcAQ9D7H3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms