Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Retreg1dQ8VE91 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg1dQ8VE91 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg1dQ8VE91 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg1dQ8VE91 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg1dQ8VE91 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg1dQ8VE91 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg1dQ8VE91 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retreg1dQ8VE91 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Retreg1dQ8VE91 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Retreg1dQ8VE91 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg1dQ8VE91 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg1dQ8VE91 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg1dQ8VE91 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg1dQ8VE91 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg1dQ8VE91 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg1dQ8VE91 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Retreg1dQ8VE91 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.87■■□□□ 1.09
Retreg1dQ8VE91 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 Gm44428-201ENSMUST00000204474 874 ntBASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Retreg1dQ8VE91 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retreg1dQ8VE91 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg1dQ8VE91 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.84■■□□□ 1.09
Retreg1dQ8VE91 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg1dQ8VE91 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Retreg1dQ8VE91 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Retreg1dQ8VE91 Gm10420-201ENSMUST00000121713 882 ntBASIC21.83■■□□□ 1.09
Retreg1dQ8VE91 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retreg1dQ8VE91 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.83■■□□□ 1.09
Retreg1dQ8VE91 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retreg1dQ8VE91 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retreg1dQ8VE91 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Retreg1dQ8VE91 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Retreg1dQ8VE91 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retreg1dQ8VE91 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg1dQ8VE91 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg1dQ8VE91 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg1dQ8VE91 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg1dQ8VE91 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Retreg1dQ8VE91 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Retreg1dQ8VE91 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Retreg1dQ8VE91 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.81■■□□□ 1.08
Retreg1dQ8VE91 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.81■■□□□ 1.08
Retreg1dQ8VE91 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg1dQ8VE91 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg1dQ8VE91 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.8■■□□□ 1.08
Retreg1dQ8VE91 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.8■■□□□ 1.08
Retreg1dQ8VE91 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg1dQ8VE91 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg1dQ8VE91 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg1dQ8VE91 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg1dQ8VE91 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Retreg1dQ8VE91 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg1dQ8VE91 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg1dQ8VE91 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retreg1dQ8VE91 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Retreg1dQ8VE91 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Retreg1dQ8VE91 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retreg1dQ8VE91 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Retreg1dQ8VE91 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg1dQ8VE91 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg1dQ8VE91 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg1dQ8VE91 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg1dQ8VE91 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg1dQ8VE91 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg1dQ8VE91 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms