Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.04■■□□□ 1.28
Tnrc18Q80WC3 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.04■■□□□ 1.28
Tnrc18Q80WC3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnrc18Q80WC3 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.03■■□□□ 1.28
Tnrc18Q80WC3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnrc18Q80WC3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tnrc18Q80WC3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.03■■□□□ 1.28
Tnrc18Q80WC3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnrc18Q80WC3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tnrc18Q80WC3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.02■■□□□ 1.28
Tnrc18Q80WC3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.02■■□□□ 1.28
Tnrc18Q80WC3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Tnrc18Q80WC3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tnrc18Q80WC3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc18Q80WC3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tnrc18Q80WC3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23■■□□□ 1.27
Tnrc18Q80WC3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tnrc18Q80WC3 Gm13241-201ENSMUST00000094493 780 ntBASIC23■■□□□ 1.27
Tnrc18Q80WC3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tnrc18Q80WC3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.99■■□□□ 1.27
Tnrc18Q80WC3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tnrc18Q80WC3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tnrc18Q80WC3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tnrc18Q80WC3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tnrc18Q80WC3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.97■■□□□ 1.27
Tnrc18Q80WC3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tnrc18Q80WC3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Tnrc18Q80WC3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tnrc18Q80WC3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
Tnrc18Q80WC3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Tnrc18Q80WC3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Tnrc18Q80WC3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.95■■□□□ 1.26
Tnrc18Q80WC3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.95■■□□□ 1.26
Tnrc18Q80WC3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tnrc18Q80WC3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tnrc18Q80WC3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tnrc18Q80WC3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tnrc18Q80WC3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tnrc18Q80WC3 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.93■■□□□ 1.26
Tnrc18Q80WC3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tnrc18Q80WC3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tnrc18Q80WC3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.91■■□□□ 1.26
Tnrc18Q80WC3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tnrc18Q80WC3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tnrc18Q80WC3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tnrc18Q80WC3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Tnrc18Q80WC3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tnrc18Q80WC3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tnrc18Q80WC3 Amer2-203ENSMUST00000225247 2662 ntBASIC22.89■■□□□ 1.25
Tnrc18Q80WC3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tnrc18Q80WC3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tnrc18Q80WC3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Tnrc18Q80WC3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.88■■□□□ 1.25
Tnrc18Q80WC3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tnrc18Q80WC3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.87■■□□□ 1.25
Tnrc18Q80WC3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tnrc18Q80WC3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Tnrc18Q80WC3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Tnrc18Q80WC3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tnrc18Q80WC3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Tnrc18Q80WC3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tnrc18Q80WC3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Tnrc18Q80WC3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.86■■□□□ 1.25
Tnrc18Q80WC3 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.86■■□□□ 1.25
Tnrc18Q80WC3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Tnrc18Q80WC3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnrc18Q80WC3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnrc18Q80WC3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnrc18Q80WC3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnrc18Q80WC3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tnrc18Q80WC3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Tnrc18Q80WC3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tnrc18Q80WC3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms