Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-2Q5R1I3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-2Q5R1I3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-2Q5R1I3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-2Q5R1I3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav7-2Q5R1I3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav7-2Q5R1I3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-2Q5R1I3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-2Q5R1I3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav7-2Q5R1I3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-2Q5R1I3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-2Q5R1I3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-2Q5R1I3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav7-2Q5R1I3 Mir3960-201ENSMUST00000198213 73 ntBASIC16.35■□□□□ 0.21
Trav7-2Q5R1I3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav7-2Q5R1I3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-2Q5R1I3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-2Q5R1I3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav7-2Q5R1I3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav7-2Q5R1I3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-2Q5R1I3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-2Q5R1I3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7-2Q5R1I3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7-2Q5R1I3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trav7-2Q5R1I3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7-2Q5R1I3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav7-2Q5R1I3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-2Q5R1I3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.32■□□□□ 0.2
Trav7-2Q5R1I3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav7-2Q5R1I3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav7-2Q5R1I3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav7-2Q5R1I3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-2Q5R1I3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav7-2Q5R1I3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms