Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1aP97445 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1aP97445 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cacna1aP97445 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1aP97445 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1aP97445 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1aP97445 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1aP97445 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cacna1aP97445 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.8■□□□□ 0.92
Cacna1aP97445 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.8■□□□□ 0.92
Cacna1aP97445 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1aP97445 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1aP97445 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1aP97445 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1aP97445 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.79■□□□□ 0.92
Cacna1aP97445 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.78■□□□□ 0.92
Cacna1aP97445 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1aP97445 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cacna1aP97445 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.78■□□□□ 0.92
Cacna1aP97445 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1aP97445 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Cacna1aP97445 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1aP97445 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.77■□□□□ 0.92
Cacna1aP97445 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Cacna1aP97445 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1aP97445 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.77■□□□□ 0.91
Cacna1aP97445 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cacna1aP97445 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1aP97445 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.76■□□□□ 0.91
Cacna1aP97445 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1aP97445 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1aP97445 Gm10232-201ENSMUST00000089221 720 ntBASIC20.75■□□□□ 0.91
Cacna1aP97445 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1aP97445 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1aP97445 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1aP97445 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cacna1aP97445 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1aP97445 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1aP97445 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1aP97445 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1aP97445 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.73■□□□□ 0.91
Cacna1aP97445 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.73■□□□□ 0.91
Cacna1aP97445 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1aP97445 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1aP97445 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1aP97445 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1aP97445 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1aP97445 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.72■□□□□ 0.91
Cacna1aP97445 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.72■□□□□ 0.91
Cacna1aP97445 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Cacna1aP97445 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cacna1aP97445 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1aP97445 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1aP97445 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cacna1aP97445 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.7■□□□□ 0.9
Cacna1aP97445 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1aP97445 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1aP97445 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1aP97445 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cacna1aP97445 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1aP97445 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1aP97445 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1aP97445 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1aP97445 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1aP97445 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1aP97445 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1aP97445 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
Cacna1aP97445 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1aP97445 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1aP97445 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.68■□□□□ 0.9
Cacna1aP97445 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1aP97445 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1aP97445 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1aP97445 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1aP97445 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1aP97445 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.67■□□□□ 0.9
Cacna1aP97445 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1aP97445 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1aP97445 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1aP97445 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1aP97445 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Cacna1aP97445 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1aP97445 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1aP97445 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1aP97445 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cacna1aP97445 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1aP97445 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1aP97445 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1aP97445 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1aP97445 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1aP97445 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1aP97445 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Cacna1aP97445 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1aP97445 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.64■□□□□ 0.89
Cacna1aP97445 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cacna1aP97445 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1aP97445 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.63■□□□□ 0.89
Cacna1aP97445 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1aP97445 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1aP97445 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms