Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YLR173WYLR173W 1827 nt7.93□□□□□ -1.14
CAF120P53836 RRI1YDL216C 1323 nt7.93□□□□□ -1.14
CAF120P53836 NPL6YMR091C 1308 nt7.93□□□□□ -1.14
CAF120P53836 PEX7YDR142C 1128 nt7.92□□□□□ -1.14
CAF120P53836 SRY1YKL218C 981 nt7.92□□□□□ -1.14
CAF120P53836 SRL2YLR082C 1179 nt7.92□□□□□ -1.14
CAF120P53836 YLR222C-AYLR222C-A 231 nt7.92□□□□□ -1.14
CAF120P53836 TEP1YNL128W 1305 nt7.92□□□□□ -1.14
CAF120P53836 LPD1YFL018C 1500 nt7.92□□□□□ -1.14
CAF120P53836 MEX67YPL169C 1800 nt7.92□□□□□ -1.14
CAF120P53836 tD(GUC)BtD(GUC)B 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)DtD(GUC)D 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)G1tD(GUC)G1 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)G2tD(GUC)G2 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)I1tD(GUC)I1 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)I2tD(GUC)I2 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)J1tD(GUC)J1 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)J2tD(GUC)J2 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)J3tD(GUC)J3 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)J4tD(GUC)J4 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)KtD(GUC)K 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)L1tD(GUC)L1 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)L2tD(GUC)L2 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)MtD(GUC)M 72 nt7.91□□□□□ -1.14
CAF120P53836 tD(GUC)OtD(GUC)O 72 nt7.91□□□□□ -1.14
CAF120P53836 MMS2YGL087C 414 nt7.91□□□□□ -1.14
CAF120P53836 RPS6AYPL090C 711 nt7.91□□□□□ -1.14
CAF120P53836 RPS6BYBR181C 711 nt7.91□□□□□ -1.14
CAF120P53836 HXT11YOL156W 1704 nt7.91□□□□□ -1.14
CAF120P53836 DUR3YHL016C 2208 nt7.9□□□□□ -1.14
CAF120P53836 YIL177CYIL177C 5277 nt7.9□□□□□ -1.14
CAF120P53836 snR57snR57 88 nt7.9□□□□□ -1.14
CAF120P53836 HTB1YDR224C 396 nt7.9□□□□□ -1.14
CAF120P53836 CDC8YJR057W 651 nt7.9□□□□□ -1.14
CAF120P53836 YKL202WYKL202W 582 nt7.9□□□□□ -1.14
CAF120P53836 YKR051WYKR051W 1257 nt7.9□□□□□ -1.14
CAF120P53836 YLR358CYLR358C 564 nt7.9□□□□□ -1.14
CAF120P53836 YOR111WYOR111W 699 nt7.9□□□□□ -1.14
CAF120P53836 OCH1YGL038C 1443 nt7.89□□□□□ -1.15
CAF120P53836 YGR016WYGR016W 573 nt7.89□□□□□ -1.15
CAF120P53836 MRPL15YLR312W-A 762 nt7.89□□□□□ -1.15
CAF120P53836 BXI1YNL305C 894 nt7.89□□□□□ -1.15
CAF120P53836 TMS1YDR105C 1422 nt7.88□□□□□ -1.15
CAF120P53836 MAS2YHR024C 1449 nt7.88□□□□□ -1.15
CAF120P53836 LUC7YDL087C 786 nt7.88□□□□□ -1.15
CAF120P53836 DOC1YGL240W 753 nt7.88□□□□□ -1.15
CAF120P53836 IME1YJR094C 1083 nt7.88□□□□□ -1.15
CAF120P53836 YNR048WYNR048W 1182 nt7.88□□□□□ -1.15
CAF120P53836 YOR364WYOR364W 369 nt7.88□□□□□ -1.15
CAF120P53836 CBP6YBR120C 489 nt7.88□□□□□ -1.15
CAF120P53836 ARO9YHR137W 1542 nt7.88□□□□□ -1.15
CAF120P53836 ATP2YJR121W 1536 nt7.88□□□□□ -1.15
CAF120P53836 DML1YMR211W 1428 nt7.87□□□□□ -1.15
CAF120P53836 YLR072WYLR072W 2082 nt7.87□□□□□ -1.15
CAF120P53836 POR2YIL114C 846 nt7.87□□□□□ -1.15
CAF120P53836 MRPL13YKR006C 795 nt7.87□□□□□ -1.15
CAF120P53836 YJL045WYJL045W 1905 nt7.87□□□□□ -1.15
CAF120P53836 YHR177WYHR177W 1362 nt7.86□□□□□ -1.15
CAF120P53836 UBP13YBL067C 2244 nt7.86□□□□□ -1.15
CAF120P53836 YDL129WYDL129W 876 nt7.86□□□□□ -1.15
CAF120P53836 snR86snR86 1004 nt7.86□□□□□ -1.15
CAF120P53836 YHL030W-AYHL030W-A 462 nt7.86□□□□□ -1.15
CAF120P53836 YLR379WYLR379W 375 nt7.86□□□□□ -1.15
CAF120P53836 FYV6YNL133C 522 nt7.86□□□□□ -1.15
CAF120P53836 MIM1YOL026C 342 nt7.86□□□□□ -1.15
CAF120P53836 LOA1YPR139C 903 nt7.86□□□□□ -1.15
CAF120P53836 PIB1YDR313C 861 nt7.85□□□□□ -1.15
CAF120P53836 ARI1YGL157W 1044 nt7.85□□□□□ -1.15
CAF120P53836 CHS7YHR142W 951 nt7.85□□□□□ -1.15
CAF120P53836 YJL047C-AYJL047C-A 135 nt7.85□□□□□ -1.15
CAF120P53836 YNL174WYNL174W 573 nt7.85□□□□□ -1.15
CAF120P53836 GPM3YOL056W 912 nt7.85□□□□□ -1.15
CAF120P53836 YBR013CYBR013C 390 nt7.85□□□□□ -1.15
CAF120P53836 LAT1YNL071W 1449 nt7.85□□□□□ -1.15
CAF120P53836 HBS1YKR084C 1836 nt7.85□□□□□ -1.15
CAF120P53836 RTG2YGL252C 1767 nt7.84□□□□□ -1.15
CAF120P53836 GET3YDL100C 1065 nt7.84□□□□□ -1.15
CAF120P53836 SHR3YDL212W 633 nt7.84□□□□□ -1.15
CAF120P53836 SRG1SRG1 551 nt7.84□□□□□ -1.15
CAF120P53836 YJL144WYJL144W 315 nt7.84□□□□□ -1.15
CAF120P53836 SNF7YLR025W 723 nt7.84□□□□□ -1.15
CAF120P53836 MDM12YOL009C 816 nt7.84□□□□□ -1.15
CAF120P53836 RCL1YOL010W 1104 nt7.84□□□□□ -1.15
CAF120P53836 YPR153WYPR153W 423 nt7.84□□□□□ -1.15
CAF120P53836 ADH4YGL256W 1149 nt7.83□□□□□ -1.16
CAF120P53836 MET22YOL064C 1074 nt7.83□□□□□ -1.16
CAF120P53836 SRM1YGL097W 1449 nt7.83□□□□□ -1.16
CAF120P53836 SSU1YPL092W 1377 nt7.83□□□□□ -1.16
CAF120P53836 YCR016WYCR016W 873 nt7.82□□□□□ -1.16
CAF120P53836 REV7YIL139C 738 nt7.82□□□□□ -1.16
CAF120P53836 RNP1YLL046C 750 nt7.82□□□□□ -1.16
CAF120P53836 SMF3YLR034C 1422 nt7.82□□□□□ -1.16
CAF120P53836 HCR1YLR192C 798 nt7.82□□□□□ -1.16
CAF120P53836 YML099W-AYML099W-A 330 nt7.82□□□□□ -1.16
CAF120P53836 OST3YOR085W 1053 nt7.82□□□□□ -1.16
CAF120P53836 YBR138CYBR138C 1575 nt7.82□□□□□ -1.16
CAF120P53836 YDL016CYDL016C 303 nt7.81□□□□□ -1.16
CAF120P53836 YDL027CYDL027C 1263 nt7.81□□□□□ -1.16
CAF120P53836 YSC83YHR017W 1158 nt7.81□□□□□ -1.16
CAF120P53836 DCG1YIR030C 735 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms