Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YAL019W-AYAL019W-A 570 nt5.95□□□□□ -1.46
SSH1P38353 CCP1YKR066C 1086 nt5.95□□□□□ -1.46
SSH1P38353 RPL31BYLR406C 342 nt5.95□□□□□ -1.46
SSH1P38353 OPI11YPR044C 354 nt5.95□□□□□ -1.46
SSH1P38353 YEL020CYEL020C 1683 nt5.94□□□□□ -1.46
SSH1P38353 YDL177CYDL177C 513 nt5.94□□□□□ -1.46
SSH1P38353 URH1YDR400W 1023 nt5.94□□□□□ -1.46
SSH1P38353 NAS6YGR232W 687 nt5.94□□□□□ -1.46
SSH1P38353 YSC83YHR017W 1158 nt5.94□□□□□ -1.46
SSH1P38353 CEF1YMR213W 1773 nt5.93□□□□□ -1.46
SSH1P38353 CBR1YIL043C 855 nt5.93□□□□□ -1.46
SSH1P38353 YOR300WYOR300W 309 nt5.93□□□□□ -1.46
SSH1P38353 VHT1YGR065C 1782 nt5.93□□□□□ -1.46
SSH1P38353 YIL055CYIL055C 1884 nt5.92□□□□□ -1.46
SSH1P38353 GCN3YKR026C 918 nt5.92□□□□□ -1.46
SSH1P38353 OPI8YKR035C 642 nt5.92□□□□□ -1.46
SSH1P38353 YLR162WYLR162W 357 nt5.92□□□□□ -1.46
SSH1P38353 HOG1YLR113W 1308 nt5.92□□□□□ -1.46
SSH1P38353 ATG22YCL038C 1587 nt5.92□□□□□ -1.46
SSH1P38353 MIP1YOR330C 3765 nt5.92□□□□□ -1.46
SSH1P38353 YGL102CYGL102C 429 nt5.91□□□□□ -1.46
SSH1P38353 FZF1YGL254W 900 nt5.91□□□□□ -1.46
SSH1P38353 RPL5YPL131W 894 nt5.91□□□□□ -1.46
SSH1P38353 SMX3YPR182W 261 nt5.91□□□□□ -1.46
SSH1P38353 ATF1YOR377W 1578 nt5.91□□□□□ -1.46
SSH1P38353 PCS60YBR222C 1632 nt5.91□□□□□ -1.46
SSH1P38353 PEX31YGR004W 1389 nt5.91□□□□□ -1.46
SSH1P38353 LAT1YNL071W 1449 nt5.91□□□□□ -1.46
SSH1P38353 HIS1YER055C 894 nt5.9□□□□□ -1.46
SSH1P38353 PRI1YIR008C 1230 nt5.9□□□□□ -1.46
SSH1P38353 YOR268CYOR268C 399 nt5.9□□□□□ -1.46
SSH1P38353 ARP3YJR065C 1350 nt5.9□□□□□ -1.47
SSH1P38353 SGV1YPR161C 1974 nt5.89□□□□□ -1.47
SSH1P38353 YHC3YJL059W 1227 nt5.89□□□□□ -1.47
SSH1P38353 SUR7YML052W 909 nt5.89□□□□□ -1.47
SSH1P38353 IRC11YOR013W 471 nt5.89□□□□□ -1.47
SSH1P38353 TMA46YOR091W 1038 nt5.88□□□□□ -1.47
SSH1P38353 FIT2YOR382W 462 nt5.88□□□□□ -1.47
SSH1P38353 ERG10YPL028W 1197 nt5.88□□□□□ -1.47
SSH1P38353 BDF2YDL070W 1917 nt5.87□□□□□ -1.47
SSH1P38353 YHR020WYHR020W 2067 nt5.87□□□□□ -1.47
SSH1P38353 YKR032WYKR032W 315 nt5.87□□□□□ -1.47
SSH1P38353 YLL056CYLL056C 897 nt5.87□□□□□ -1.47
SSH1P38353 YOX1YML027W 1158 nt5.87□□□□□ -1.47
SSH1P38353 SML1YML058W 315 nt5.87□□□□□ -1.47
SSH1P38353 RPR1RPR1 369 nt5.87□□□□□ -1.47
SSH1P38353 PRE5YMR314W 705 nt5.87□□□□□ -1.47
SSH1P38353 ICP55YER078C 1536 nt5.87□□□□□ -1.47
SSH1P38353 YJL163CYJL163C 1668 nt5.87□□□□□ -1.47
SSH1P38353 MFG1YDL233W 1377 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)BtG(GCC)B 71 nt5.86□□□□□ -1.47
SSH1P38353 SUF16tG(GCC)C 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)D1tG(GCC)D1 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)D2tG(GCC)D2 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)EtG(GCC)E 71 nt5.86□□□□□ -1.47
SSH1P38353 SUF20tG(GCC)F1 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)F2tG(GCC)F2 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)G1tG(GCC)G1 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)G2tG(GCC)G2 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)J1tG(GCC)J1 71 nt5.86□□□□□ -1.47
SSH1P38353 SUF23tG(GCC)J2 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)MtG(GCC)M 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)O1tG(GCC)O1 71 nt5.86□□□□□ -1.47
SSH1P38353 SUF17tG(GCC)O2 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)P1tG(GCC)P1 71 nt5.86□□□□□ -1.47
SSH1P38353 tG(GCC)P2tG(GCC)P2 71 nt5.86□□□□□ -1.47
SSH1P38353 DYS1YHR068W 1164 nt5.86□□□□□ -1.47
SSH1P38353 CUE4YML101C 354 nt5.86□□□□□ -1.47
SSH1P38353 MRPL19YNL185C 477 nt5.86□□□□□ -1.47
SSH1P38353 SKN1YGR143W 2316 nt5.86□□□□□ -1.47
SSH1P38353 GFA1YKL104C 2154 nt5.86□□□□□ -1.47
SSH1P38353 ECM38YLR299W 1983 nt5.86□□□□□ -1.47
SSH1P38353 NUP49YGL172W 1419 nt5.85□□□□□ -1.47
SSH1P38353 MSC3YLR219W 2187 nt5.85□□□□□ -1.47
SSH1P38353 YDR415CYDR415C 1125 nt5.85□□□□□ -1.47
SSH1P38353 HSP12YFL014W 330 nt5.85□□□□□ -1.47
SSH1P38353 AIM46YHR199C 933 nt5.85□□□□□ -1.47
SSH1P38353 YJL144WYJL144W 315 nt5.85□□□□□ -1.47
SSH1P38353 YJR107WYJR107W 987 nt5.85□□□□□ -1.47
SSH1P38353 SWD1YAR003W 1281 nt5.85□□□□□ -1.47
SSH1P38353 PPM2YOL141W 2088 nt5.85□□□□□ -1.47
SSH1P38353 NTE1YML059C 5040 nt5.85□□□□□ -1.47
SSH1P38353 TRP5YGL026C 2124 nt5.84□□□□□ -1.47
SSH1P38353 SUB2YDL084W 1341 nt5.84□□□□□ -1.47
SSH1P38353 TOS6YNL300W 309 nt5.84□□□□□ -1.47
SSH1P38353 SEC62YPL094C 825 nt5.84□□□□□ -1.47
SSH1P38353 EHD3YDR036C 1503 nt5.84□□□□□ -1.48
SSH1P38353 DUG1YFR044C 1446 nt5.83□□□□□ -1.48
SSH1P38353 STT3YGL022W 2157 nt5.83□□□□□ -1.48
SSH1P38353 CTF8YHR191C 402 nt5.83□□□□□ -1.48
SSH1P38353 YOL046CYOL046C 675 nt5.83□□□□□ -1.48
SSH1P38353 DFR1YOR236W 636 nt5.83□□□□□ -1.48
SSH1P38353 YPR076WYPR076W 375 nt5.83□□□□□ -1.48
SSH1P38353 ADH5YBR145W 1056 nt5.83□□□□□ -1.48
SSH1P38353 MSS1YMR023C 1581 nt5.83□□□□□ -1.48
SSH1P38353 KTR5YNL029C 1569 nt5.82□□□□□ -1.48
SSH1P38353 HED1YDR014W-A 489 nt5.82□□□□□ -1.48
SSH1P38353 ATG36YJL185C 882 nt5.82□□□□□ -1.48
SSH1P38353 YKL018C-AYKL018C-A 300 nt5.82□□□□□ -1.48
SSH1P38353 MIA40YKL195W 1212 nt5.82□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms