Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.73■□□□□ 0.59
Foxa2P35583 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Foxa2P35583 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa2P35583 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Foxa2P35583 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa2P35583 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa2P35583 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Foxa2P35583 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.72■□□□□ 0.59
Foxa2P35583 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Foxa2P35583 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.72■□□□□ 0.59
Foxa2P35583 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa2P35583 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa2P35583 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Foxa2P35583 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa2P35583 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa2P35583 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa2P35583 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.7■□□□□ 0.58
Foxa2P35583 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Foxa2P35583 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa2P35583 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa2P35583 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Foxa2P35583 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Foxa2P35583 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.69■□□□□ 0.58
Foxa2P35583 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.69■□□□□ 0.58
Foxa2P35583 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.69■□□□□ 0.58
Foxa2P35583 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Foxa2P35583 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa2P35583 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.68■□□□□ 0.58
Foxa2P35583 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.68■□□□□ 0.58
Foxa2P35583 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa2P35583 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa2P35583 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa2P35583 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa2P35583 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Foxa2P35583 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa2P35583 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.67■□□□□ 0.58
Foxa2P35583 Terc-201ENSMUST00000082862 423 ntBASIC18.67■□□□□ 0.58
Foxa2P35583 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa2P35583 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Foxa2P35583 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Foxa2P35583 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.66■□□□□ 0.58
Foxa2P35583 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Foxa2P35583 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa2P35583 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa2P35583 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa2P35583 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Foxa2P35583 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.64■□□□□ 0.57
Foxa2P35583 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.64■□□□□ 0.57
Foxa2P35583 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa2P35583 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa2P35583 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa2P35583 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa2P35583 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa2P35583 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.62■□□□□ 0.57
Foxa2P35583 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa2P35583 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.61■□□□□ 0.57
Foxa2P35583 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.61■□□□□ 0.57
Foxa2P35583 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.61■□□□□ 0.57
Foxa2P35583 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Foxa2P35583 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa2P35583 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Foxa2P35583 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Foxa2P35583 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa2P35583 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Foxa2P35583 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa2P35583 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa2P35583 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa2P35583 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms