Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Thbs1P35441 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Thbs1P35441 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Thbs1P35441 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Thbs1P35441 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Thbs1P35441 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Thbs1P35441 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thbs1P35441 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.56■□□□□ 0.88
Thbs1P35441 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.56■□□□□ 0.88
Thbs1P35441 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thbs1P35441 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Thbs1P35441 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thbs1P35441 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thbs1P35441 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thbs1P35441 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thbs1P35441 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thbs1P35441 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thbs1P35441 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Thbs1P35441 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Thbs1P35441 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Thbs1P35441 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Thbs1P35441 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Thbs1P35441 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Thbs1P35441 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.52■□□□□ 0.88
Thbs1P35441 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.52■□□□□ 0.87
Thbs1P35441 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.51■□□□□ 0.87
Thbs1P35441 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thbs1P35441 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.51■□□□□ 0.87
Thbs1P35441 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.51■□□□□ 0.87
Thbs1P35441 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Thbs1P35441 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.51■□□□□ 0.87
Thbs1P35441 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.51■□□□□ 0.87
Thbs1P35441 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thbs1P35441 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thbs1P35441 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.5■□□□□ 0.87
Thbs1P35441 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Thbs1P35441 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Thbs1P35441 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.5■□□□□ 0.87
Thbs1P35441 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thbs1P35441 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thbs1P35441 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thbs1P35441 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thbs1P35441 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.49■□□□□ 0.87
Thbs1P35441 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Thbs1P35441 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.49■□□□□ 0.87
Thbs1P35441 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
Thbs1P35441 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Thbs1P35441 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Thbs1P35441 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Thbs1P35441 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thbs1P35441 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.47■□□□□ 0.87
Thbs1P35441 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thbs1P35441 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.47■□□□□ 0.87
Thbs1P35441 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thbs1P35441 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Thbs1P35441 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.46■□□□□ 0.87
Thbs1P35441 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thbs1P35441 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thbs1P35441 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thbs1P35441 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.45■□□□□ 0.86
Thbs1P35441 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thbs1P35441 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thbs1P35441 Gm6311-201ENSMUST00000073790 878 ntBASIC20.44■□□□□ 0.86
Thbs1P35441 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thbs1P35441 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Thbs1P35441 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thbs1P35441 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thbs1P35441 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thbs1P35441 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thbs1P35441 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thbs1P35441 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thbs1P35441 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.43■□□□□ 0.86
Thbs1P35441 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Thbs1P35441 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thbs1P35441 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Thbs1P35441 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.42■□□□□ 0.86
Thbs1P35441 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thbs1P35441 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thbs1P35441 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Thbs1P35441 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Thbs1P35441 Gm11175-201ENSMUST00000116172 543 ntBASIC20.41■□□□□ 0.86
Thbs1P35441 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms