Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa3P02831 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa3P02831 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hoxa3P02831 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Hoxa3P02831 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa3P02831 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.61■□□□□ 0.57
Hoxa3P02831 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa3P02831 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa3P02831 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa3P02831 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa3P02831 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hoxa3P02831 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa3P02831 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa3P02831 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa3P02831 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa3P02831 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa3P02831 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa3P02831 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa3P02831 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hoxa3P02831 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Hoxa3P02831 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxa3P02831 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Hoxa3P02831 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxa3P02831 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa3P02831 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.57■□□□□ 0.56
Hoxa3P02831 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.57■□□□□ 0.56
Hoxa3P02831 Gm44428-201ENSMUST00000204474 874 ntBASIC18.57■□□□□ 0.56
Hoxa3P02831 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hoxa3P02831 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa3P02831 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa3P02831 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hoxa3P02831 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.57■□□□□ 0.56
Hoxa3P02831 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hoxa3P02831 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa3P02831 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.56■□□□□ 0.56
Hoxa3P02831 Gm10420-201ENSMUST00000121713 882 ntBASIC18.56■□□□□ 0.56
Hoxa3P02831 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.56■□□□□ 0.56
Hoxa3P02831 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa3P02831 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hoxa3P02831 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hoxa3P02831 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hoxa3P02831 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.55■□□□□ 0.56
Hoxa3P02831 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hoxa3P02831 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hoxa3P02831 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hoxa3P02831 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hoxa3P02831 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxa3P02831 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxa3P02831 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxa3P02831 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.54■□□□□ 0.56
Hoxa3P02831 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxa3P02831 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxa3P02831 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.53■□□□□ 0.56
Hoxa3P02831 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxa3P02831 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxa3P02831 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hoxa3P02831 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.52■□□□□ 0.56
Hoxa3P02831 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Hoxa3P02831 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxa3P02831 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxa3P02831 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxa3P02831 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxa3P02831 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.51■□□□□ 0.55
Hoxa3P02831 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxa3P02831 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxa3P02831 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxa3P02831 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Hoxa3P02831 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxa3P02831 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxa3P02831 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxa3P02831 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxa3P02831 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxa3P02831 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxa3P02831 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.48■□□□□ 0.55
Hoxa3P02831 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxa3P02831 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Hoxa3P02831 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.47■□□□□ 0.55
Hoxa3P02831 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxa3P02831 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxa3P02831 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxa3P02831 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxa3P02831 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hoxa3P02831 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hoxa3P02831 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxa3P02831 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Hoxa3P02831 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hoxa3P02831 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxa3P02831 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa3P02831 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa3P02831 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa3P02831 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa3P02831 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa3P02831 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 626.1 ms