Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc179J3QM76 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc179J3QM76 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc179J3QM76 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc179J3QM76 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc179J3QM76 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc179J3QM76 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.02□□□□□ -0.16
Ccdc179J3QM76 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.02□□□□□ -0.17
Ccdc179J3QM76 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc179J3QM76 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc179J3QM76 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc179J3QM76 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc179J3QM76 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc179J3QM76 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc179J3QM76 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc179J3QM76 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc179J3QM76 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc179J3QM76 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc179J3QM76 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc179J3QM76 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc179J3QM76 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14□□□□□ -0.17
Ccdc179J3QM76 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc179J3QM76 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc179J3QM76 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc179J3QM76 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc179J3QM76 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc179J3QM76 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc179J3QM76 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc179J3QM76 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc179J3QM76 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc179J3QM76 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc179J3QM76 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc179J3QM76 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc179J3QM76 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc179J3QM76 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc179J3QM76 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc179J3QM76 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc179J3QM76 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc179J3QM76 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc179J3QM76 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc179J3QM76 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc179J3QM76 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc179J3QM76 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc179J3QM76 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.93□□□□□ -0.18
Ccdc179J3QM76 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Mir3960-201ENSMUST00000198213 73 ntBASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc179J3QM76 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc179J3QM76 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms