Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-2D3Z4R4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-2D3Z4R4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-2D3Z4R4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nkx6-2D3Z4R4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx6-2D3Z4R4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-2D3Z4R4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-2D3Z4R4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-2D3Z4R4 Iqck-206ENSMUST00000208658 2891 ntBASIC18.15■□□□□ 0.5
Nkx6-2D3Z4R4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-2D3Z4R4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-2D3Z4R4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx6-2D3Z4R4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx6-2D3Z4R4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-2D3Z4R4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-2D3Z4R4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.14■□□□□ 0.49
Nkx6-2D3Z4R4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkx6-2D3Z4R4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-2D3Z4R4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-2D3Z4R4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx6-2D3Z4R4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-2D3Z4R4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-2D3Z4R4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-2D3Z4R4 Gm25262-201ENSMUST00000174934 133 ntBASIC18.12■□□□□ 0.49
Nkx6-2D3Z4R4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.12■□□□□ 0.49
Nkx6-2D3Z4R4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-2D3Z4R4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-2D3Z4R4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-2D3Z4R4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-2D3Z4R4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-2D3Z4R4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-2D3Z4R4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-2D3Z4R4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-2D3Z4R4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-2D3Z4R4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-2D3Z4R4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nkx6-2D3Z4R4 Gm27322-201ENSMUST00000184007 104 ntBASIC18.09■□□□□ 0.49
Nkx6-2D3Z4R4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-2D3Z4R4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-2D3Z4R4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-2D3Z4R4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-2D3Z4R4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Nkx6-2D3Z4R4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-2D3Z4R4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nkx6-2D3Z4R4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-2D3Z4R4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Nkx6-2D3Z4R4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx6-2D3Z4R4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nkx6-2D3Z4R4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-2D3Z4R4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-2D3Z4R4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-2D3Z4R4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-2D3Z4R4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-2D3Z4R4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-2D3Z4R4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nkx6-2D3Z4R4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-2D3Z4R4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Nkx6-2D3Z4R4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx6-2D3Z4R4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-2D3Z4R4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-2D3Z4R4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Nkx6-2D3Z4R4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-2D3Z4R4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx6-2D3Z4R4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx6-2D3Z4R4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkx6-2D3Z4R4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkx6-2D3Z4R4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 270.1 ms