Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.13■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gm6311-201ENSMUST00000073790 878 ntBASIC16.13■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9n-2A0A0G2JDP3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9n-2A0A0G2JDP3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.12■□□□□ 0.17
Trav9n-2A0A0G2JDP3 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.12■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Trav9n-2A0A0G2JDP3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Terc-201ENSMUST00000082862 423 ntBASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-2A0A0G2JDP3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-2A0A0G2JDP3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trav9n-2A0A0G2JDP3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9n-2A0A0G2JDP3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.01■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9n-2A0A0G2JDP3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav9n-2A0A0G2JDP3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms