Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 AC005332.8-201ENST00000622750 2735 ntBASIC16.85■□□□□ 0.29
LHX6Q9UPM6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 OR8S1-201ENST00000310194 1080 ntBASIC16.84■□□□□ 0.29
LHX6Q9UPM6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.84■□□□□ 0.29
LHX6Q9UPM6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 BCL2-203ENST00000589955 5011 ntBASIC16.84■□□□□ 0.29
LHX6Q9UPM6 FEM1AP3-201ENST00000403722 1741 ntBASIC16.84■□□□□ 0.29
LHX6Q9UPM6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX6Q9UPM6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LHX6Q9UPM6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LHX6Q9UPM6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LHX6Q9UPM6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 TERF1P3-201ENST00000505638 1227 ntBASIC16.83■□□□□ 0.28
LHX6Q9UPM6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 NKAPP1-205ENST00000585790 367 ntBASIC16.83■□□□□ 0.28
LHX6Q9UPM6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 PGM5P2-202ENST00000637225 1043 ntBASIC16.83■□□□□ 0.28
LHX6Q9UPM6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX6Q9UPM6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 IRX1P1-201ENST00000438849 1838 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 MEIS3P1-201ENST00000495167 958 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 AC025678.2-201ENST00000562061 970 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms