Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 KRT18P55-202ENST00000578578 1546 ntBASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AC091607.1-201ENST00000490318 1060 ntBASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 MIR3180-1-201ENST00000580374 94 ntBASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 MIR3180-3-201ENST00000584616 94 ntBASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AC092119.3-201ENST00000612618 583 ntBASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUEDC1Q9NWM3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 TPSP2-201ENST00000561760 610 ntBASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 AC068880.1-201ENST00000507289 2297 ntBASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 AC012317.2-201ENST00000623305 2251 ntBASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUEDC1Q9NWM3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 AP000347.1-202ENST00000435868 847 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms