Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AL024508.2-201ENST00000607749 1894 ntBASIC14.47□□□□□ -0.09
RAB40CQ96S21 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC116407.2-201ENST00000613639 860 ntBASIC14.47□□□□□ -0.09
RAB40CQ96S21 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 KRT18P23-201ENST00000435622 1283 ntBASIC14.46□□□□□ -0.09
RAB40CQ96S21 B3GAT3P1-201ENST00000471720 806 ntBASIC14.46□□□□□ -0.09
RAB40CQ96S21 AC011506.1-201ENST00000474329 610 ntBASIC14.46□□□□□ -0.09
RAB40CQ96S21 C1QBPP2-201ENST00000528754 825 ntBASIC14.46□□□□□ -0.09
RAB40CQ96S21 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 ITM2C-210ENST00000620962 501 ntBASIC14.46□□□□□ -0.09
RAB40CQ96S21 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40CQ96S21 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40CQ96S21 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40CQ96S21 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB40CQ96S21 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40CQ96S21 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB40CQ96S21 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
RAB40CQ96S21 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40CQ96S21 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40CQ96S21 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40CQ96S21 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 AC100803.2-201ENST00000562459 1963 ntBASIC14.45□□□□□ -0.1
RAB40CQ96S21 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 FSCN1P1-201ENST00000568912 1481 ntBASIC14.45□□□□□ -0.1
RAB40CQ96S21 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40CQ96S21 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 CA15P1-201ENST00000481698 905 ntBASIC14.45□□□□□ -0.1
RAB40CQ96S21 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 MIR3180-4-201ENST00000582223 153 ntBASIC14.45□□□□□ -0.1
RAB40CQ96S21 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB40CQ96S21 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms