Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 MIR1238-201ENST00000408483 83 ntBASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 KRT8P7-201ENST00000533003 1432 ntBASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 AC092338.2-201ENST00000568827 1415 ntBASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 DUTP2-201ENST00000519164 463 ntBASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 AC009065.1-201ENST00000564055 1225 ntBASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC47A1Q96FL8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 AL390955.1-201ENST00000428694 934 ntBASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 AL355075.4-201ENST00000554988 638 ntBASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 WWOX-216ENST00000569818 525 ntBASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 AL118508.1-201ENST00000613502 2345 ntBASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC47A1Q96FL8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms