Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIML2Q8N7C3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIML2Q8N7C3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIML2Q8N7C3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIML2Q8N7C3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 AP003041.3-201ENST00000527151 707 ntBASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 WWOX-216ENST00000569818 525 ntBASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 MIR4785-201ENST00000585005 73 ntBASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIML2Q8N7C3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 BX088651.1-201ENST00000540551 451 ntBASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 AL023803.3-201ENST00000615559 522 ntBASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
TRIML2Q8N7C3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIML2Q8N7C3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms