Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 AL627223.1-201ENST00000416693 442 ntBASIC21.52■■□□□ 1.04
SLX4Q8IY92 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 AC093214.1-201ENST00000511688 1107 ntBASIC21.52■■□□□ 1.04
SLX4Q8IY92 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 LINC00628-201ENST00000628516 1289 ntBASIC21.52■■□□□ 1.04
SLX4Q8IY92 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.52■■□□□ 1.03
SLX4Q8IY92 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.51■■□□□ 1.03
SLX4Q8IY92 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLX4Q8IY92 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.5■■□□□ 1.03
SLX4Q8IY92 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SLX4Q8IY92 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 CXCL1P1-201ENST00000502804 216 ntBASIC21.5■■□□□ 1.03
SLX4Q8IY92 AC069262.1-201ENST00000539058 672 ntBASIC21.5■■□□□ 1.03
SLX4Q8IY92 AC099522.2-201ENST00000607001 744 ntBASIC21.5■■□□□ 1.03
SLX4Q8IY92 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.5■■□□□ 1.03
SLX4Q8IY92 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SLX4Q8IY92 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.5■■□□□ 1.03
SLX4Q8IY92 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SLX4Q8IY92 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLX4Q8IY92 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 LINC00982-205ENST00000420957 435 ntBASIC21.49■■□□□ 1.03
SLX4Q8IY92 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLX4Q8IY92 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SLX4Q8IY92 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 AC009949.1-201ENST00000623048 1830 ntBASIC21.48■■□□□ 1.03
SLX4Q8IY92 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 AL031598.1-201ENST00000561511 1773 ntBASIC21.48■■□□□ 1.03
SLX4Q8IY92 BX276092.7-203ENST00000637198 1536 ntBASIC21.48■■□□□ 1.03
SLX4Q8IY92 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLX4Q8IY92 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.48■■□□□ 1.03
SLX4Q8IY92 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms