Protein–RNA interactions for Protein: Q86UN3

RTN4RL2, Reticulon-4 receptor-like 2, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL2Q86UN3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 AC211429.1-201ENST00000415277 523 ntBASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 NEK4P2-201ENST00000580004 1012 ntBASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 HTR7P1-202ENST00000624664 4411 ntBASIC15.21■□□□□ 0.03
RTN4RL2Q86UN3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 REXO1L11P-201ENST00000620964 1927 ntBASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.21■□□□□ 0.02
RTN4RL2Q86UN3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 AC009949.1-201ENST00000623048 1830 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 ATP5G1P1-201ENST00000448724 379 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 SEC1P-202ENST00000473944 940 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 AC024243.1-201ENST00000609234 778 ntBASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4RL2Q86UN3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 AL138688.1-201ENST00000624851 1594 ntBASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 AC113347.1-201ENST00000413321 391 ntBASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 DUTP2-201ENST00000519164 463 ntBASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RTN4RL2Q86UN3 AC009065.1-201ENST00000564055 1225 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms