Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.41■□□□□ 0.06
Trim80Q3V061 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.4■□□□□ 0.06
Trim80Q3V061 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim80Q3V061 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trim80Q3V061 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim80Q3V061 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Trim80Q3V061 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim80Q3V061 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim80Q3V061 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.39■□□□□ 0.05
Trim80Q3V061 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.39■□□□□ 0.05
Trim80Q3V061 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim80Q3V061 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim80Q3V061 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.39■□□□□ 0.05
Trim80Q3V061 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim80Q3V061 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim80Q3V061 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Trim80Q3V061 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim80Q3V061 Gm6376-201ENSMUST00000209407 580 ntBASIC15.38■□□□□ 0.05
Trim80Q3V061 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim80Q3V061 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim80Q3V061 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim80Q3V061 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim80Q3V061 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim80Q3V061 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.37■□□□□ 0.05
Trim80Q3V061 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim80Q3V061 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim80Q3V061 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim80Q3V061 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms