Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
RPL39P62891 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.63□□□□□ -0.39
RPL39P62891 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
RPL39P62891 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.62□□□□□ -0.39
RPL39P62891 CICP6-201ENST00000457191 2729 ntBASIC12.62□□□□□ -0.39
RPL39P62891 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
RPL39P62891 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RPL39P62891 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.62□□□□□ -0.39
RPL39P62891 MIR3180-5-201ENST00000583743 153 ntBASIC12.62□□□□□ -0.39
RPL39P62891 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RPL39P62891 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RPL39P62891 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RPL39P62891 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RPL39P62891 AC008741.2-201ENST00000612792 3115 ntBASIC12.62□□□□□ -0.39
RPL39P62891 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.62□□□□□ -0.39
RPL39P62891 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
RPL39P62891 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 LINC00304-203ENST00000565008 1864 ntBASIC12.61□□□□□ -0.39
RPL39P62891 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RPL39P62891 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 AC105020.1-201ENST00000435356 2205 ntBASIC12.61□□□□□ -0.39
RPL39P62891 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.61□□□□□ -0.39
RPL39P62891 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.61□□□□□ -0.39
RPL39P62891 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RPL39P62891 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.61□□□□□ -0.39
RPL39P62891 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.61□□□□□ -0.39
RPL39P62891 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RPL39P62891 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.61□□□□□ -0.39
RPL39P62891 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
RPL39P62891 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.61□□□□□ -0.39
RPL39P62891 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
RPL39P62891 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.61□□□□□ -0.39
RPL39P62891 AC026366.1-201ENST00000488803 879 ntBASIC12.61□□□□□ -0.39
RPL39P62891 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.61□□□□□ -0.39
RPL39P62891 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.61□□□□□ -0.39
RPL39P62891 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RPL39P62891 MIR6786-201ENST00000616843 113 ntBASIC12.61□□□□□ -0.39
RPL39P62891 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
RPL39P62891 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.61□□□□□ -0.39
RPL39P62891 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms