Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA3P29320 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA3P29320 AC009949.1-201ENST00000623048 1830 ntBASIC17.35■□□□□ 0.37
EPHA3P29320 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
EPHA3P29320 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHA3P29320 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHA3P29320 AC026471.5-201ENST00000615068 467 ntBASIC17.35■□□□□ 0.37
EPHA3P29320 AL049637.2-201ENST00000641778 930 ntBASIC17.35■□□□□ 0.37
EPHA3P29320 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHA3P29320 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EPHA3P29320 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 LINC00167-201ENST00000530583 1419 ntBASIC17.35■□□□□ 0.37
EPHA3P29320 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EPHA3P29320 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EPHA3P29320 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA3P29320 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA3P29320 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA3P29320 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
EPHA3P29320 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHA3P29320 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
EPHA3P29320 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 KRT18P29-201ENST00000397031 1267 ntBASIC17.34■□□□□ 0.37
EPHA3P29320 AC012618.2-201ENST00000428058 849 ntBASIC17.34■□□□□ 0.37
EPHA3P29320 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.34■□□□□ 0.37
EPHA3P29320 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
EPHA3P29320 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.34■□□□□ 0.37
EPHA3P29320 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA3P29320 BX088651.1-201ENST00000540551 451 ntBASIC17.34■□□□□ 0.37
EPHA3P29320 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA3P29320 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 AC233702.5-201ENST00000584107 538 ntBASIC17.34■□□□□ 0.37
EPHA3P29320 AP001412.1-201ENST00000608405 714 ntBASIC17.34■□□□□ 0.37
EPHA3P29320 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHA3P29320 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EPHA3P29320 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA3P29320 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA3P29320 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.33■□□□□ 0.37
EPHA3P29320 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.33■□□□□ 0.37
EPHA3P29320 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
EPHA3P29320 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EPHA3P29320 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
EPHA3P29320 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHA3P29320 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
EPHA3P29320 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
EPHA3P29320 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EPHA3P29320 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA3P29320 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHA3P29320 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.33■□□□□ 0.37
EPHA3P29320 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA3P29320 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EPHA3P29320 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.33■□□□□ 0.36
EPHA3P29320 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.33■□□□□ 0.36
EPHA3P29320 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EPHA3P29320 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
EPHA3P29320 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.33■□□□□ 0.36
EPHA3P29320 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
EPHA3P29320 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EPHA3P29320 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 ITM2C-210ENST00000620962 501 ntBASIC17.33■□□□□ 0.36
EPHA3P29320 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
EPHA3P29320 AC106886.4-201ENST00000623557 2502 ntBASIC17.33■□□□□ 0.36
EPHA3P29320 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
EPHA3P29320 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
EPHA3P29320 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.33■□□□□ 0.36
EPHA3P29320 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms