Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AL118508.1-201ENST00000613502 2345 ntBASIC13.32□□□□□ -0.28
SMIM17P0DL12 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 AL023875.1-201ENST00000640777 796 ntBASIC13.32□□□□□ -0.28
SMIM17P0DL12 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM17P0DL12 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM17P0DL12 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 NIFKP9-201ENST00000419265 221 ntBASIC13.31□□□□□ -0.28
SMIM17P0DL12 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.31□□□□□ -0.28
SMIM17P0DL12 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 KRT18P41-201ENST00000518924 1277 ntBASIC13.31□□□□□ -0.28
SMIM17P0DL12 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM17P0DL12 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM17P0DL12 AL109659.2-201ENST00000606809 1674 ntBASIC13.31□□□□□ -0.28
SMIM17P0DL12 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms