Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.26■■□□□ 1.31
COL5A2P05997 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL5A2P05997 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL5A2P05997 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL5A2P05997 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.25■■□□□ 1.31
COL5A2P05997 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.25■■□□□ 1.31
COL5A2P05997 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
COL5A2P05997 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.25■■□□□ 1.31
COL5A2P05997 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
COL5A2P05997 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC23.25■■□□□ 1.31
COL5A2P05997 AC138761.1-201ENST00000584393 385 ntBASIC23.25■■□□□ 1.31
COL5A2P05997 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.25■■□□□ 1.31
COL5A2P05997 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.25■■□□□ 1.31
COL5A2P05997 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL5A2P05997 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL5A2P05997 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL5A2P05997 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.25■■□□□ 1.31
COL5A2P05997 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
COL5A2P05997 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.24■■□□□ 1.31
COL5A2P05997 ACTL9-202ENST00000612068 1252 ntBASIC23.24■■□□□ 1.31
COL5A2P05997 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 AL627223.1-201ENST00000416693 442 ntBASIC23.24■■□□□ 1.31
COL5A2P05997 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC23.24■■□□□ 1.31
COL5A2P05997 FAM86GP-201ENST00000448322 971 ntBASIC23.24■■□□□ 1.31
COL5A2P05997 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.24■■□□□ 1.31
COL5A2P05997 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.24■■□□□ 1.31
COL5A2P05997 MIR4745-201ENST00000577608 62 ntBASIC23.24■■□□□ 1.31
COL5A2P05997 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.24■■□□□ 1.31
COL5A2P05997 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
COL5A2P05997 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL5A2P05997 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.23■■□□□ 1.31
COL5A2P05997 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.23■■□□□ 1.31
COL5A2P05997 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
COL5A2P05997 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.23■■□□□ 1.31
COL5A2P05997 BX276092.7-203ENST00000637198 1536 ntBASIC23.23■■□□□ 1.31
COL5A2P05997 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 AC092474.2-201ENST00000424288 719 ntBASIC23.23■■□□□ 1.31
COL5A2P05997 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.23■■□□□ 1.31
COL5A2P05997 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.23■■□□□ 1.31
COL5A2P05997 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC23.23■■□□□ 1.31
COL5A2P05997 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.23■■□□□ 1.31
COL5A2P05997 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC23.23■■□□□ 1.31
COL5A2P05997 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.23■■□□□ 1.31
COL5A2P05997 AC025678.2-201ENST00000562061 970 ntBASIC23.23■■□□□ 1.31
COL5A2P05997 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.23■■□□□ 1.31
COL5A2P05997 AC099522.2-201ENST00000607001 744 ntBASIC23.23■■□□□ 1.31
COL5A2P05997 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
COL5A2P05997 AJ011932.1-201ENST00000621707 465 ntBASIC23.23■■□□□ 1.31
COL5A2P05997 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL5A2P05997 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 AL590787.1-201ENST00000568856 1315 ntBASIC23.22■■□□□ 1.31
COL5A2P05997 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.22■■□□□ 1.31
COL5A2P05997 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC23.22■■□□□ 1.31
COL5A2P05997 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 ACTG1P4-201ENST00000425123 1122 ntBASIC23.22■■□□□ 1.31
COL5A2P05997 DDX43P3-201ENST00000441064 443 ntBASIC23.22■■□□□ 1.31
COL5A2P05997 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.22■■□□□ 1.31
COL5A2P05997 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.22■■□□□ 1.31
COL5A2P05997 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.22■■□□□ 1.31
COL5A2P05997 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC23.22■■□□□ 1.31
COL5A2P05997 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL5A2P05997 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
COL5A2P05997 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.21■■□□□ 1.31
COL5A2P05997 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
COL5A2P05997 Z92544.3-201ENST00000624747 417 ntBASIC23.21■■□□□ 1.31
COL5A2P05997 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
COL5A2P05997 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
COL5A2P05997 AC009949.1-201ENST00000623048 1830 ntBASIC23.21■■□□□ 1.31
COL5A2P05997 AC073592.3-201ENST00000625118 1834 ntBASIC23.21■■□□□ 1.31
COL5A2P05997 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms