Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.57■■□□□ 1.04
GRIN3BO60391 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.57■■□□□ 1.04
GRIN3BO60391 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.57■■□□□ 1.04
GRIN3BO60391 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GRIN3BO60391 AC132938.5-201ENST00000624980 1813 ntBASIC21.57■■□□□ 1.04
GRIN3BO60391 MYLKP1-201ENST00000509077 1580 ntBASIC21.57■■□□□ 1.04
GRIN3BO60391 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
GRIN3BO60391 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GRIN3BO60391 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.56■■□□□ 1.04
GRIN3BO60391 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
GRIN3BO60391 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
GRIN3BO60391 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
GRIN3BO60391 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 RN7SL589P-201ENST00000481268 310 ntBASIC21.56■■□□□ 1.04
GRIN3BO60391 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
GRIN3BO60391 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GRIN3BO60391 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
GRIN3BO60391 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.55■■□□□ 1.04
GRIN3BO60391 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 COX5BP2-201ENST00000392354 334 ntBASIC21.55■■□□□ 1.04
GRIN3BO60391 KLF4P1-201ENST00000412782 1185 ntBASIC21.55■■□□□ 1.04
GRIN3BO60391 SPDYE7P-202ENST00000420373 878 ntBASIC21.55■■□□□ 1.04
GRIN3BO60391 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 RBPMS2P1-201ENST00000437762 623 ntBASIC21.55■■□□□ 1.04
GRIN3BO60391 FAM185BP-201ENST00000443595 716 ntBASIC21.55■■□□□ 1.04
GRIN3BO60391 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 AC079140.1-201ENST00000508039 487 ntBASIC21.55■■□□□ 1.04
GRIN3BO60391 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.55■■□□□ 1.04
GRIN3BO60391 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.55■■□□□ 1.04
GRIN3BO60391 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GRIN3BO60391 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.55■■□□□ 1.04
GRIN3BO60391 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.55■■□□□ 1.04
GRIN3BO60391 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GRIN3BO60391 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
GRIN3BO60391 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
GRIN3BO60391 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.55■■□□□ 1.04
GRIN3BO60391 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
GRIN3BO60391 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GRIN3BO60391 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.54■■□□□ 1.04
GRIN3BO60391 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.54■■□□□ 1.04
GRIN3BO60391 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.54■■□□□ 1.04
GRIN3BO60391 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.54■■□□□ 1.04
GRIN3BO60391 GPS2P2-201ENST00000430745 888 ntBASIC21.54■■□□□ 1.04
GRIN3BO60391 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GRIN3BO60391 RPS2P32-201ENST00000439199 892 ntBASIC21.54■■□□□ 1.04
GRIN3BO60391 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.54■■□□□ 1.04
GRIN3BO60391 AC097493.3-201ENST00000509725 367 ntBASIC21.54■■□□□ 1.04
GRIN3BO60391 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.54■■□□□ 1.04
GRIN3BO60391 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.54■■□□□ 1.04
GRIN3BO60391 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.54■■□□□ 1.04
GRIN3BO60391 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GRIN3BO60391 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.54■■□□□ 1.04
GRIN3BO60391 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.54■■□□□ 1.04
GRIN3BO60391 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GRIN3BO60391 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GRIN3BO60391 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.53■■□□□ 1.04
GRIN3BO60391 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3BO60391 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.53■■□□□ 1.04
GRIN3BO60391 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3BO60391 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms