Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
EIF3FO00303 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
EIF3FO00303 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
EIF3FO00303 AC008894.3-201ENST00000624324 3103 ntBASIC17.43■□□□□ 0.38
EIF3FO00303 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
EIF3FO00303 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
EIF3FO00303 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.43■□□□□ 0.38
EIF3FO00303 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.43■□□□□ 0.38
EIF3FO00303 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.43■□□□□ 0.38
EIF3FO00303 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.43■□□□□ 0.38
EIF3FO00303 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EIF3FO00303 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.43■□□□□ 0.38
EIF3FO00303 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
EIF3FO00303 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
EIF3FO00303 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EIF3FO00303 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EIF3FO00303 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.42■□□□□ 0.38
EIF3FO00303 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
EIF3FO00303 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.42■□□□□ 0.38
EIF3FO00303 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 AL138688.1-201ENST00000624851 1594 ntBASIC17.42■□□□□ 0.38
EIF3FO00303 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 CHCHD2P8-201ENST00000429873 447 ntBASIC17.42■□□□□ 0.38
EIF3FO00303 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.42■□□□□ 0.38
EIF3FO00303 BX276092.5-203ENST00000456199 560 ntBASIC17.42■□□□□ 0.38
EIF3FO00303 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.42■□□□□ 0.38
EIF3FO00303 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.42■□□□□ 0.38
EIF3FO00303 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.42■□□□□ 0.38
EIF3FO00303 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EIF3FO00303 PCDHB18P-201ENST00000524813 2368 ntBASIC17.42■□□□□ 0.38
EIF3FO00303 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
EIF3FO00303 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 AL355312.1-201ENST00000407115 2176 ntBASIC17.41■□□□□ 0.38
EIF3FO00303 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.41■□□□□ 0.38
EIF3FO00303 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.41■□□□□ 0.38
EIF3FO00303 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.41■□□□□ 0.38
EIF3FO00303 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.41■□□□□ 0.38
EIF3FO00303 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.41■□□□□ 0.38
EIF3FO00303 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.41■□□□□ 0.38
EIF3FO00303 IGHV3-41-201ENST00000613121 348 ntBASIC17.41■□□□□ 0.38
EIF3FO00303 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
EIF3FO00303 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms