Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AL121761.2-201ENST00000598007 1648 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AC104390.1-201ENST00000555663 520 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AC009065.1-201ENST00000564055 1225 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 REXO1L10P-201ENST00000615707 1290 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 REXO1L12P-201ENST00000622156 912 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AC112497.1-201ENST00000624824 639 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 AL135905.2-201ENST00000584934 1404 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 LINC00304-203ENST00000565008 1864 ntBASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV5A0A0B4J249 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms