Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 TSPY16P-201ENST00000449843 468 ntBASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 UGT1A2P-201ENST00000454886 866 ntBASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 AC008761.3-201ENST00000624803 892 ntBASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 AC092919.2-201ENST00000623631 1645 ntBASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 AC003669.1-201ENST00000334569 611 ntBASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 CRB3P1-201ENST00000449338 276 ntBASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 DUX4L27-201ENST00000554796 1261 ntBASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.61■■□□□ 1.05
ARFGEF1Q9Y6D6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF1Q9Y6D6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 OR8S1-201ENST00000310194 1080 ntBASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 GK-202ENST00000378941 458 ntTSL 3 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SPDYE11-202ENST00000450699 704 ntBASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SPDYE9P-201ENST00000570642 692 ntBASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SPDYE10P-202ENST00000612005 668 ntBASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SPDYE8P-202ENST00000612377 668 ntBASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF1Q9Y6D6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 TFAMP1-201ENST00000412727 736 ntBASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 AC112191.1-201ENST00000523689 701 ntBASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms