Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 AL591424.1-201ENST00000442569 1213 ntBASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42EP3Q9UKI2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 AC098831.1-202ENST00000438821 336 ntBASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 MIR3687-2-201ENST00000577708 61 ntBASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 MIR3687-1-201ENST00000614492 61 ntBASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 FAM197Y3-203ENST00000618346 717 ntBASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.91□□□□□ -0.02
CDC42EP3Q9UKI2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 KRT8P32-201ENST00000512863 1461 ntBASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 AP000997.3-201ENST00000623333 2250 ntBASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 AL139424.1-201ENST00000607572 797 ntBASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 AC116407.3-201ENST00000623905 1129 ntBASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42EP3Q9UKI2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 AL133373.2-201ENST00000623187 2828 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms