Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 MYC-208ENST00000641036 567 ntBASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 AC116562.4-202ENST00000641738 218 ntBASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 AC112777.1-201ENST00000540175 1423 ntBASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 AL023284.2-201ENST00000405850 579 ntBASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 MCCD1P1-208ENST00000445732 328 ntBASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 KRT8P32-201ENST00000512863 1461 ntBASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCF3Q9NUQ8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 KRT8P45-201ENST00000414328 1447 ntBASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 SLC25A1P2-201ENST00000430693 912 ntBASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 MIR4674-201ENST00000582457 87 ntBASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 AL096828.2-201ENST00000567259 1965 ntBASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCF3Q9NUQ8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCF3Q9NUQ8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms